January-November 2025
Ali W, Grzybowski M, Torres-Rodríguez JV, Li FY, Shrestha N, Mathivanan RK, de Bernardeaux G, Hoang K, Mural R, Roston RL, Schnable JC, Sahay S (2025) Quantitative genetics of photosynthetic trait variation in maize. Journal of Experimental Botany 76 (14):4141-4153. doi:10.1093/jxb/eraf198
Azizi K, Zhao S, Ayoubi S, Kamangarpour A, Nabiollahi K, Ge YF, Zhao KG, Rodrigo-Comino J, Demattê JAM (2026) Integrating proximal sensing data (soil spectra and magnetic susceptibility) with the common covariates to predict soil carbon pools in semiarid regions. Soil Till Res 256. doi:ARTN 10684010.1016/j.still.2025.106840
Becker SM, Franz TE, Ge YF, Luck JD, Heeren DM (2025) Geophysical tools for agricultural management: Trends, challenges, and opportunities. Vadose Zone J 24 (4). doi:ARTN e7002910.1002/vzj2.70029
Beltran DG, Wan T, Seravalli J, Horova M, Jones C, Li S, Ma P, Becker DF, Mower JP, Yao Q, Pan Y, Yu H, Steyn AJC, Zhang L (2025) Aromatic Patch in WhiB-Like Transcription Factors Facilitates Primary Sigma Factor Interaction in Mycobacterium tuberculosis. bioRxiv. doi:10.1101/2025.06.05.653497
Bi Y, Walia H, Obata T, Morota G (2025) Genomic prediction of metabolic content in rice grain in response to warmer night conditions. Crop Sci 65 (1). doi:ARTN e2143510.1002/csc2.21435
Brown JH, Vijayan J, Rodrigues de Queiroz A, Figueroa Ramos N, Bickford N, Wuellner M, Buan NR, Stone JM, Glowacka K, Roston RL (2025) Coenzyme M: An Archaeal Antioxidant as an Agricultural Biostimulant. Antioxidants (Basel) 14 (2). doi:10.3390/antiox14020140
Butler NM, Carlson AT, Starker C, Voytas DF (2025) Viral-mediated delivery of morphogenic regulators enables leaf transformation in (L.). Plant Biotechnology Journal 23 (10):4491-4499. doi:10.1111/pbi.70250
Cahoon EB, Kim P, Xie T, Solis AG, Han GS, Gong X, Dunn TM (2024) Sphingolipid homeostasis: How do cells know when enough is enough? Implications for plant pathogen responses. Plant Physiol 197 (1). doi:10.1093/plphys/kiae460
Chamara N, Ge Y, Russo S (2025) FireLog: An open-source, low-cost system for temperature logging during wildland fires with high spatial and temporal resolution. HardwareX 24:e00722. doi:10.1016/j.ohx.2025.e00722
Chandran AKN, Irvin L, Dhatt BK, Chopra Y, McArtney S, Surpin MA, Reddy SK, Walia H (2025) Differential ABA sensitivity of superior and inferior rice grains is linked to cell cycle entry into endoreduplication. Front Plant Sci 16. doi:ARTN 158502210.3389/fpls.2025.1585022
Chopra Y, Xie XY, Clothier J, Ghosh S, Yu HF, Walia H, Sattler SE (2025) Hyperspectral imaging to characterize the vegetative tissue biochemical changes in response to water deficit conditions in sorghum (). Front Plant Sci 16. doi:ARTN 151599810.3389/fpls.2025.1515998
Chowdhury NB, Chandran AKN, Walia H, Saha R (2025) Transcriptome enhanced rice grain metabolic model identifies histidine level as a marker for grain chalkiness. Sci Rep-Uk 15 (1). doi:ARTN 1643210.1038/s41598-025-00504-6
Davis JM, Coffey LM, Turkus J, López-Corona L, Linders K, Ullagaddi C, Santra DK, Schnable PS, Schnable JC (2025) Assessing the Impact of Yield Plasticity on Hybrid Performance in Maize. Physiol Plantarum 177 (3). doi:ARTN e7027810.1111/ppl.70278
Davis JM, Gaillard M, Tross MC, Shrestha N, Ostermann I, Grove RJ, Li BS, Benes B, Schnable JC (2025) 3D reconstruction enables high-throughput phenotyping and quantitative genetic analysis of phyllotaxy. Plant Phenomics 7 (1). doi:ARTN 10002310.1016/j.plaphe.2025.100023
de Oliveira Santos T, Teixeira do Amaral Junior A, Batista Pinto V, Barboza Bispo R, Campostrini E, Glowacka K, Rohem Simao B, de Paula Bernardo W, Nicacio Viana F, Silveira V, Apolinario de Souza Filho G (2025) Morphophysiological and proteomic profiling unveiling mechanisms underlying nitrogen use efficiency in popcorn (Zea mays var. everta). Plant Physiol Biochem 221:109581. doi:10.1016/j.plaphy.2025.109581
Dele-Osibanjo T, Obata T (2025) Hexokinase-phosphoglucose isomerase and hexokinase-glucose-6-phosphate dehydrogenase multienzyme complex dynamics are affected by glycolysis and oxidative pentose phosphate pathway flux. J Biol Chem 301 (5). doi:ARTN 10946010.1016/j.jbc.2025.109460
Demattê JAM, Poppiel RR, Novais JJM, Rosin NA, Minasny B, Savin IY, Grunwald S, Chen SC, Hong YS, Huang JY, Chabrillat S, van Lier QD, Ben-Dor E, Gomez C, Zhang GL, Amorim MTA, Vogel LG, Rosas JTF, Milewski R, Gholizadeh A, Zhogolev A, Campusano JP, Ma YX, Jang HJ, Rudiyanto, Wang CK, Rizzo R, Tziolas N, Tsakiridis N, Kodaira M, Kumar DN, Dharumarajan S, Ge YF, Vaudour E, Ayoubi S, Biney JKM, Belal A, Marandi SN, Hafshejani NA, Kalopesa E, Mello DC, Francelino MR, Salama ESM, Abdelbaki A (2025) Frontiers in earth observation for global soil properties assessment linked to environmental and socio-economic factors. Innovation-Amsterdam 6 (9). doi:ARTN 10098510.1016/j.xinn.2025.100985
Dematte JAM, Rizzo R, Rosin NA, Poppiel RR, Novais JJM, Amorim MTA, Rodriguez-Albarracin HS, Rosas JTF, Bartsch BDA, Vogel LG, Minasny B, Grunwald S, Ge Y, Ben-Dor E, Gholizadeh A, Gomez C, Chabrillat S, Francos N, Fiantis D, Belal A, Tsakiridis N, Kalopesa E, Naimi S, Ayoubi S, Tziolas N, Das BS, Zalidis G, Francelino MR, Mello DC, Hafshejani NA, Peng Y, Ma Y, Coblinski JA, Wadoux AMJ, Savin I, Malone BP, Karyotis K, Milewski R, Vaudour E, Wang C, Salama ESM, Shepherd KD (2025) A global soil spectral grid based on space sensing. Sci Total Environ 968:178791. doi:10.1016/j.scitotenv.2025.178791
Dong J, Croslow SW, Lane ST, Castro DC, Blanford J, Zhou S, Park K, Burgess S, Root M, Cahoon EB, Shanklin J, Sweedler JV, Zhao H, Hudson ME (2025) Enhancing lipid production in plant cells through automated high-throughput genome engineering and phenotyping. Plant Cell 37 (2). doi:10.1093/plcell/koaf026
Engelhorn J, Snodgrass SJ, Kok A, Seetharam AS, Schneider M, Kiwit T, Singh A, Banf M, Doan DTH, Khaipho-Burch M, Runcie DE, Sánchez-Camargo VA, Bader R, Torres-Rodriguez JV, Sun GC, Stam M, Fiorani F, Beier S, Schnable JC, Bass HW, Hufford MB, Stich B, Frommer WB, Ross-Ibarra J, Hartwig T (2025) Genetic variation at transcription factor binding sites largely explains phenotypic heritability in maize. Nat Genet 57 (9). doi:10.1038/s41588-025-02246-7
Ferris TW, Hurst PJ, Yobi A, Alartouri B, Li A, Angelovici R, Clemente TE, Holding DR (2025) Large scale deletion and rebalancing within the kafirin family in sorghum. Front Plant Sci 16. doi:ARTN 168602710.3389/fpls.2025.1686027
Foster LR, Yang JL, Riethoven JJM, Mukhtar H, Schachtman DP (2025) Inoculation frequency and maize genotype influence plant growth-promoting effects of soil bacteria under low nitrogen conditions. Front Plant Sci 16. doi:ARTN 163715610.3389/fpls.2025.1637156
Gautam B, Kim H, Wang C, Park K, Cahoon EB, Sedbrook JC (2025) Meeting Liquid Biofuel and Bioproduct Goals: Biotechnological Design of the Intermediate Oilseeds Pennycress and Camelina, and Beyond. J Exp Bot. doi:10.1093/jxb/eraf415
Glowacka K (2025) Mechanisms underpinning natural variation in non-photochemical quenching kinetics. Biochem Soc Trans 53 (5):1237-1248. doi:10.1042/BST20253087
Glowacka K, Kromdijk J, Kucera K, Xie J, Cavanagh AP, Leonelli L, Leakey ADB, Ort DR, Niyogi KK, Long SP (2018) Photosystem II Subunit S overexpression increases the efficiency of water use in a field-grown crop. Nat Commun 9 (1):868. doi:10.1038/s41467-018-03231-x
Guo W, Dong R, Okedigba AO, Sanchez JE, Agarkova IV, Abisamra EM, Jelinsky A, Riekhof W, Noor L, Dunigan DD, Van Etten JL, Capelluto DGS, Xiao C, Li L (2025) Membrane Composition Modulates Vp54 Binding: A Combined Experimental and Computational Study. Pathogens 14 (10). doi:10.3390/pathogens14101000
Henriques LR, Botelho BBF, Carlson RM, Carvalho J, Oliveira EG, Agarkova IV, Van Etten JL, Dunigan DD, Rodrigues RAL (2025) Revealing the hidden diversity of Chlorella heliozoae-infecting giant viruses. Npj Viruses 3 (1):12. doi:10.1038/s44298-025-00088-y
Hubing V, Marquis A, Ziemann C, Moriyama H, Moriyama EN, Zhang L (2025) Cytoplasmic Shift of Interferon Regulatory Factors Co-Evolved With Jawed Vertebrate Innate Immunity. J Med Virol 97 (2):e70247. doi:10.1002/jmv.70247
Islam MD, Liu WX, Izere P, Singh P, Yu C, Riggan B, Zhang K, Jhala AJ, Knezevic S, Ge YF, Pitla S, Luck J, Shi YY (2025) Towards real-time weed detection and segmentation with lightweight CNN models on edge devices. Comput Electron Agr 237. doi:ARTN 11060010.1016/j.compag.2025.110600
Istipliler D, Tross MC, Bouwens B, Jin HY, Ge YF, Yang JL, Mural RV, Schnable JC (2025) Heritability, heterosis, and hybrid/inbred classification ability of maize leaf hyperspectral signals under changing soil nitrogen. Crop Sci 65 (3). doi:ARTN e7007310.1002/csc2.70073
Izere P, Zhao BQ, Schnable J, Ge YF, Shi YY (2025) Positioning Accuracy of Rtk-Gnss-Enabled Agricultural Crop Sensing. J Asabe 68 (4):559-571. doi:10.13031/ja.16306
Jaramillo PA, Russo SE, Duque A, Castaño N, Zuleta D (2025) Marked tree demographic variation along subtle elevation differences partially explains species' habitat associations in an Amazonian forest. J Ecol 113 (10):2860-2874. doi:10.1111/1365-2745.70132
Johnson S, Hyten D (2025) Genomic Markers Associated With Soybean Resistance to the Stem Borer, Dectes texanus (Coleoptera: Cerambycidae). Plant Direct 9 (3):e70040. doi:10.1002/pld3.70040
Kim H, Liu L, Han L, Park K, Kim HJ, Nguyen T, Nazarenus TJ, Cahoon RE, Haslam RP, Ciftci O, Napier JA, Cahoon EB (2025) Oilseed-based metabolic engineering of astaxanthin and related ketocarotenoids using a plant-derived pathway: Lab-to-field-to-application. Plant Biotechnol J 23 (8):3451-3464. doi:10.1111/pbi.70148
Komorowska-Trepner M, Glowacka K (2025) The Role of Silicon Compounds in Plant Responses to Cadmium Stress: A Review. Plants (Basel) 14 (18). doi:10.3390/plants14182911
Krupka M, Wolska L, Piechowicz L, Glowacka K, Piotrowicz-Cieslak AI (2025) The Impact of Tetracycline on the Soil Microbiome and the Rhizosphere of Lettuce (Lactuca sativa L.). Int J Mol Sci 26 (7). doi:10.3390/ijms26072854
Kumari A, Njuguna JN, Zheng XY, Kromdijk J, Sacks EJ, Glowacka K (2025) Genetic Basis of Non-Photochemical Quenching and Photosystem II Efficiency Responses to Chilling in the Biomass Crop. Gcb Bioenergy 17 (1). doi:ARTN e7001510.1111/gcbb.70015
Li FY, Grzybowski M, Roston RL, Schnable JC (2025) Nighttime fluorescence phenotyping reduces environmental variability for photosynthetic traits and enables the identification of candidate loci in maize. Front Plant Sci 16. doi:ARTN 159533910.3389/fpls.2025.1595339
Li JT, Ge YF, Puntel LA, Heeren DM, Bai G, Balboa GR, Gamon JA, Arkebauer TJ, Shi YY (2025) Devising optimized maize nitrogen stress indices in complex field conditions from UAV hyperspectral imagery. Precis Agric 26 (1). doi:ARTN 310.1007/s11119-024-10205-1
Libalah MB, Russo SE, Chuyong GB, Thomas D, Kenfack D (2025) Demographic rates and diversity vary with tree stature and ontogenetic stage in an African tropical rainforest. Ecosphere 16 (1). doi:ARTN e7014410.1002/ecs2.70144
Lievens EJP, Agarkova IV, Dunigan DD, Van Etten JL, Becks L (2025) High life history diversity within a single genus of algal viruses. ISME J 19 (1). doi:10.1093/ismejo/wraf146
Maia T, Ojha B, Alvarez S, Naldrett MJ, Rojas CM (2025) AtNHR2A and AtNHR2B: Two Players of the Plant Secretory Pathway Functioning in Biotic Stress Responses. Phytopathology. doi:10.1094/PHYTO-07-25-0237-R
Malakar A, Snow DD, Kaiser M, Walia H, Roberts TL, Ray C (2025) Ferrihydrite level in paddy soil affects inorganic arsenic species in rice grains. Environ Sci-Proc Imp 27 (10):3107-3118. doi:10.1039/d5em00475f
Mangal H, Linders K, Turkus J, Shrestha N, Long B, Cebert E, Kuang XY, Torres-Rodriguez JV, Schnable JC (2025) Genes and pathways determining flowering time variation in temperate-adapted sorghum. Plant J 122 (5). doi:ARTN e7025010.1111/tpj.70250
Mathivanan RK, Pedersen C, Turkus J, Shrestha N, Ali W, Torres-Rodriguez JV, Mural RV, Obata T, Schnable JC (2025) Transcripts and genomic intervals associated with variation in metabolite abundance in maize leaves under field conditions. Bmc Genomics 26 (1). doi:ARTN 43410.1186/s12864-025-11580-3
Mendez K, Adviento-Borbe MA, Quiñones C, Larazo W, Ottis B, Lorence A, Walia H (2025) A technique for measuring non-structural carbohydrate reserves in flag leaves of paddy rice using Fourier transform infrared spectroscopy (FTIR). Plant Methods 21 (1). doi:ARTN 14110.1186/s13007-025-01444-y
Mukhtar H, Easterly AC, Bachle KB, Ozorio D, Creech CF, Schachtman DP (2025) Peptide nucleic acid (PNA) clamps enhance root microbiome profiling in wheat and maize. Environ Microbiome 20 (1):148. doi:10.1186/s40793-025-00808-0
Mukhtar H, Hao JJ, Xu G, Bergmeyer E, Ulutas M, Yang JL, Schachtman DP (2025) Nitrogen input differentially shapes the rhizosphere microbiome diversity and composition across diverse maize lines. Biol Fert Soils 61 (1):1-12. doi:10.1007/s00374-024-01863-4
Nsoh B, Katimbo A, Dejonge KC, Liang WZ, Guo HZ, Ge YF, Heeren DM, Shi YY, Qiao X, Rudnick DR, Nakabuye HN, Birru G, Kabenge I, Wanyama J (2025) Crop2Cloud platform: Real-time data integration for agricultural water monitoring. Smart Agr Technol 12. doi:ARTN 10116610.1016/j.atech.2025.101166
Ojeda-Rivera JO, Barnes AC, Ainsworth EA, Angelovici R, Basso B, Brindisi LJ, Brooks MD, Busch W, Buttelmann GL, Castellano MJ, Chen JP, Costich DE, de Leon N, Emmett BD, Ertl D, Fitzsimmons SL, Flint-Garcia SA, Gore MA, Guan KY, Hale CO, Herr S, Hirsch CN, Holding DH, Holland JB, Hsu SK, Hua J, Hufford MB, Kaeppler SM, Leary EN, Liu ZY, Mahama AA, Mccubbin TJ, Messina CD, Michael TP, Miller SJ, Murray SC, Okumoto S, Oren E, Park AN, Pineros MA, Pugh NA, Raboy V, Rellan-alvarez R, Romay MC, Rooney T, Roston RL, Sawers RJH, Schnable JC, Schulz AJ, Scott MP, Springer NM, Washburn JD, Zambrano MA, Zhai JJ, Zou JT, Buckler ES (2025) Designing a nitrogen-efficient cold-tolerant maize for modern agricultural systems. Plant Cell 37 (7). doi:ARTN koaf13910.1093/plcell/koaf139
Ojha B, Grosz K, Rojas CM (2025) The secretome of the environmental bacterium PBL3 has broad-spectrum antimicrobial activity against plant and human pathogenic bacteria. Microbiology Spectrum. doi:10.1128/spectrum.02669-25
Orzol A, Glowacka K, Patsch R, Piernik A, Gallegos-Cerda SD, Cardenas-Perez S (2025) The local environment influences salt tolerance differently in four Salicornia europaea L. inland populations. Sci Rep 15 (1):13128. doi:10.1038/s41598-025-97394-5
Ozair F, Adak A, Murray SC, Alpers RT, Aviles AC, Lima DC, Edwards J, Ertl D, Gore MA, Hirsch CN, Knoll JE, Schnable JC, Singh MP, Sparks EE, Thompson A, Weldekidan T, Xu WW (2025) Phenotypic plasticity in maize grain yield: Genetic and environmental insights of response to environmental gradients. Plant Genome-Us 18 (3). doi:ARTN e7007810.1002/tpg2.70078
Park K, Quach T, Clark TJ, Kim H, Zhang T, Wang M, Guo M, Sato S, Nazarenus TJ, Blume R, Blume Y, Zhang C, Moose SP, Swaminathan K, Schwender J, Clemente TE, Cahoon EB (2025) Development of vegetative oil sorghum: From lab-to-field. Plant Biotechnol J 23 (2):660-673. doi:10.1111/pbi.14527
Partida C, Safanelli JL, Mitu SM, Murad MOF, Ge Y, Ferguson R, Shepherd K, Sanderman J (2025) Building a near-infrared (NIR) soil spectral dataset and predictive machine learning models using a handheld NIR spectrophotometer. Data Brief 58:111229. doi:10.1016/j.dib.2024.111229
Peng Y, Ben-Dor E, Biswas A, Chabrillat S, Demattê JAM, Ge YF, Gholizadeh A, Gomez C, Guerrero C, Herrick J, Maynard JJ, Mouazen AM, Ma YX, McBratney AB, Minasny B, Ramirez-Lopez L, Robertson AHJ, Rossel RAV, Shi Z, Stenberg B, Wadoux AMJC, Winowiecki LA, Zhang GL (2025) Spectroscopic solutions for generating new global soil information. Innovation-Amsterdam 6 (5). doi:ARTN 10083910.1016/j.xinn.2025.100839
Petro TM, Esmael A, Pattee GL, Al-Sarmi F, Chiodo F, Agarkova IV, Dunigan DD, Van Etten JL (2025) Expression of human superoxide dismutase (SOD) 1 G93A and chlorovirus ATCV-1 SOD increases the response of macrophages to inflammatory stimulants, including ATCV-1 major capsid protein glycans. Immunobiology 230 (2):152881. doi:10.1016/j.imbio.2025.152881
Powadi AA, Jubery TZ, Tross M, Shrestha N, Coffey L, Schnable JC, Schnable PS, Ganapathysubramanian B (2025) Enhancing yield prediction from plot-level satellite imagery through genotype and environment feature disentanglement. Front Plant Sci 16. doi:ARTN 161783110.3389/fpls.2025.1617831
Quach TN, Guo M, Nazarenus T, Sato SJ, Wang M, Zhang TL, Nersesian N, Ge ZX, Ullagaddi C, Li M, Yu B, Schnable JC, Clemente TE (2025) In-context promoter bashing of the gene models functionally annotated as bundle sheath cell preferred expressing phosphoenolpyruvate carboxykinase and alanine aminotransferase. Crop Sci 65 (2). doi:ARTN e7003910.1002/csc2.70039
Rauh O, Schulze T, Van Etten JL, Thiel G, Moroni A (2025) Modular architecture of K(+) channels: the functional plasticity of the pore module. EMBO Rep 26 (15):3730-3746. doi:10.1038/s44319-025-00519-0
Rensner JJ, Kim H, Park K, Cahoon EB, Lee YJ (2025) OzMALDI: A Gas-Phase, In-Source Ozonolysis Reaction for Efficient Double-Bond Assignment in Mass Spectrometry Imaging with Matrix-Assisted Laser Desorption/Ionization. Anal Chem 97 (13):7447-7455. doi:10.1021/acs.analchem.5c00284
Rhee SY, Anstett DN, Cahoon EB, Covarrubias-Robles AA, Danquah E, Dudareva N, Ezura H, Gilbert KJ, Gutierrez RA, Heck M, Lowry DB, Mittler R, Muday G, Mukankusi C, Nelson ADL, Restrepo S, Rouached H, Seki M, Walker B, Way D, Weber APM (2025) Resilient plants, sustainable future. Trends Plant Sci 30 (4):382-388. doi:10.1016/j.tplants.2024.11.001
Roston R, Rolfe S, Bell M, Mao D, Maga M (2025) Addressing continuous and discrete morphological variation in computational anatomy. Integr Comp Biol 65:S444-S445
Sahay S, de Bernardeaux G, Gamba D, Lasky JR, Glowacka K (2025) Nonphotochemical quenching changes with abiotic stressor and developmental stages. bioRxiv. doi:10.1101/2025.05.14.654125
Saidi S, Ayoubi S, Shirvani M, Mireei SA, Ge YF, Zhao KG (2025) Use of Vis-NIR reflectance spectroscopy for estimating soil phosphorus sorption parameters at the watershed scale. Soil Till Res 248. doi:ARTN 10646010.1016/j.still.2025.106460
Sanderman J, Partida C, Safanelli JL, Shepherd K, Ge YF, Mitu SM, Ferguson R (2025) Application of a Handheld Near Infrared Spectrophotometer to Farm-Scale Soil Carbon Monitoring. Eur J Soil Sci 76 (1). doi:ARTN e7005310.1111/ejss.70053
Shen ZH, Zhang HC, Bian LM, Zhou L, Tian QF, Ge YF (2026) AI-powered UAV remote sensing for drought stress phenotyping: Automated chlorophyll estimation in individual plants using deep learning and instance segmentation. Expert Syst Appl 299. doi:ARTN 13014110.1016/j.eswa.2025.130141
Shrestha K, Thapa K, Kaler E, Taniguchi M, Sattler SE, Schnable JC, Louis J (2025) Employing Spectral Features to Accelerate Sorghum Phenotyping Against Sap-Feeding Aphids. Plant Direct 9 (7). doi:ARTN e7009210.1002/pld3.70092
Shrestha N, Powadi A, Davis J, Ayanlade TT, Liu HY, Tross MC, Mathivanan RK, Bares J, Lopez-Corona L, Turkus J, Coffey L, Jubery TZ, Ge YF, Sarkar S, Schnable JC, Ganapathysubramanian B, Schnable PS (2025) Plot-level satellite imagery can substitute for UAVs in assessing maize phenotypes across multistate field trials. Plants People Planet 7 (4):1011-1026. doi:10.1002/ppp3.10613
Singh A, Newton L, Schnable JC, Thompson AM (2025) Unveiling shared genetic regulators of plant architectural and biomass yield traits in the Sorghum Association Panel. Journal of Experimental Botany 76 (6):1625-1643. doi:10.1093/jxb/eraf012
Sobanska K, Mokrzycka M, Przewoznik M, Pniewski T, Glowacka K (2025) Exploring chilling stress and recovery dynamics in C4 perennial grass of Miscanthus sinensis. PLoS One 20 (1):e0308162. doi:10.1371/journal.pone.0308162
Souza JW, Henriques LR, Carlson RM, Botelho BBF, Carvalho J, Santos JPN, Aguiar E, Agarkova IV, Van Etten JL, Dunigan DD, Rodrigues RAL (2025) New Isolates of Betachloroviruses Shed Light on the Diversity and Biological Complexity of an Unexplored Group of Giant Algal Viruses. Viruses 17 (8). doi:10.3390/v17081096
Stalanowska K, Glowacka K, Buszewski B, Lahuta LB (2025) The Resistance of Germinating Pea (Pisum sativum L.) Seeds to Silver Nanoparticles. Plants (Basel) 14 (11). doi:10.3390/plants14111594
Su Y, Yi Y, Ge SC, Wang Z, Wei ZY, Liu XL, Zhang C, Xie QJ, Wang HF, Qian YW, Yu B, Liu YF (2025) Circular RNAs derived from MIR156D promote rice heading by repressing transcription elongation of pri-miR156d through R-loop formation. Nat Plants 11 (4). doi:10.1038/s41477-025-01961-7
Suhr Van Haute MJ, Yang Q, Korth N, Happ MM, Kok CR, Miao C, Clarke JL, Karnik K, Eskridge KM, Urrea CA, Hyten DL, Schnable JC, Rose DJ, Benson AK (2025) Genetic variation and historical breeding patterns in common bean (Phaseolus vulgaris L.) affect fermentation patterns by the human gut microbiome. Commun Biol 8 (1):1690. doi:10.1038/s42003-025-09089-2
Sun YP, Snow D, Walia H, Li X (2025) Land application of beef cattle manure facilitates the transmission of antibiotic resistance genes from soil to lettuce. Environ Sci-Adv 4 (12):2127-2137. doi:10.1039/d5va00204d
Tian QF, Zhang HC, Bian LM, Zhou L, Shen ZH, Ge YF (2025) Field-based phenotyping for poplar seedlings biomass evaluation based on zero-shot segmentation with multimodal UAV images. Comput Electron Agr 236. doi:ARTN 11046210.1016/j.compag.2025.110462
Torres-Valenzuela LS, Franco-Urbano C, Navia-Porras DP, Sarmiento N, Rojas C (2025) Characterization and Chemoinformatic Prediction of Retention Indices of Metabolites in Coffee and Plantain Byproduct Flours Using Gas Chromatography-Time-of-Flight Mass Spectrometry. J Agr Food Chem 73 (47):30473-30487. doi:10.1021/acs.jafc.5c11135
Van Etten JL, Agarkova IV, Dunigan DD, Shao Q, Fang Q (2025) Emerging structure of chlorovirus PBCV-1. Virology 608:110552. doi:10.1016/j.virol.2025.110552
Wang C, Zhou B, Chen X, Zeng L (2025) The Two Tomato Ubiquitin E1 Enzymes Play Unequal Roles in Host Immunity. Mol Plant Pathol 26 (10):e70160. doi:10.1111/mpp.70160
Wang C, Zhou B, Zhang Y, Zeng L (2025) Plant ubiquitin E2 enzymes UBC32, UBC33, and UBC34 are involved in ERAD and function in host stress tolerance. BMC Plant Biol 25 (1):412. doi:10.1186/s12870-025-06419-8
Wang ZC, Zhang HC, Bian LM, Zhou L, Ge YF (2025) Accurate plant 3D reconstruction and phenotypic traits extraction via stereo imaging and multi-view point cloud alignment. Front Plant Sci 16. doi:ARTN 164238810.3389/fpls.2025.1642388
Wojtkowiak E, Czyz KB, Basinska-Barczak A, Pudelska H, Glowacka K, Pniewski T, Sobanska K (2025) Enhanced micropropagation of a sustainable approach to optimal regenerated plant growth. Plant Cell Tiss Org 162 (2). doi:ARTN 3510.1007/s11240-025-03102-6
Wyzga B, Kaminski K, Glowacka K, Hac-Wydro K (2025) Lipid membrane composition modulates Hinokitiol's effects on keratinocytes and fibroblasts. Chem Phys Lipids 270:105511. doi:10.1016/j.chemphyslip.2025.105511
Yang YG, Pec GJ, Russo SE (2025) Distinct roles of prokaryotes and fungi in belowground networks and predicting plant diversity and productivity in a North American grassland. Fems Microbiol Ecol 101 (11). doi:ARTN fiaf09910.1093/femsec/fiaf099
Yu R, Zhi X, Ceriotti LF, Skippington E, Rice DW, Su HJ, Barkman TJ, Sun C, Liu Y, Fang D, Chen X, dePamphilis CW, Mower JP, Sanchez-Puerta MV, Palmer JD, Zhou R (2025) A record-setting mitogenome in the holoparasitic plant Balanophora yakushimensis accompanied by exceptional loss of organellar DNA repair and recombination genes. BMC Biol 23 (1):344. doi:10.1186/s12915-025-02449-8
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